SERVICES

ABiL scientists work collaboratively with partners from government, academic, non-profit, and industry sectors to provide custom-designed and turn-key bioinformatics solutions for a variety of data analysis challenges. Our services include end-to-end project management including conception, planning and execution.

Omics Analysis

NGS Data Management


Processing, analysis and interpretation of NGS data from a variety of sequencing platforms (Illumina, PacBio, Ion Torrent/Proton and Roche 454) including Hierarchical Genome Assembly Process (HGAP) analysis.




Database & Web Services


Creation of species- or system-specific genome browsers and/or data repositories along with the web-services tools used to access, query and modify the data.




Big Data, HPC & Cloud Computing


Access to the HPC software and hardware infrastructure needed for big data management and analysis.




Machine Learning


Development and application of machine learning and data mining algorithms for the modeling, classification and prediction of high-dimensional data.




Biostatistical Analysis


Expertise in a wide variety of statistical techniques and experimental design methods for bioinformatics and genomics studies.





Molecular Typing

Molecular Epdemiology


Sequence-based techniques for the temporal and geospatial surveillance of microbial pathogens and outbreak analysis.




Multilocus Sequence Typing


Automated suite of tools for the analysis of MLST data from a wide variety of bacterial pathogens.




Genome-based Typing


Development and application of multi-scale methods for typing microbial pathogens, e.g. SNP-typing, k-mer based approaches, multi-locus typing, average nucleotide identity and whole genome comparisons.




Novel Typing Schemes


Annotation and comparison of whole genome sequences for the development of novel SNP- or gene-based typing schemes at different levels of resolution.




Genotype-Phenotype Relationship


Comparison and multi-dimensional clustering of whole genome sequences to infer the genetic basis of clinically relevant phenotypes.




Antibiotic Resistance


Candidate gene-based and genome-wide approaches to inferring the genetic basis of antibiotic resistance for a wide variety of chemotherapeutics and species.




Comparative Genomics


A wide variety of computational techniques for the comparison of whole genome sequences, within and between species, for the interrogation of specific biological questions.




Evolution & Phylogenetics


Numerous software packages for making inferences about the action of evolutionary forces on gene/protein sequences along with tools for inferring evolutionary relationships among sequences.





Big Data & Analytics

NGS Data Management


Processing, analysis and interpretation of NGS data from a variety of sequencing platforms (Illumina, PacBio, Ion Torrent/Proton and Roche 454) including Hierarchical Genome Assembly Process (HGAP) analysis.




Database & Web Services


Creation of species- or system-specific genome browsers and/or data repositories along with the web-services tools used to access, query and modify the data.




Big Data, HPC & Cloud Computing


Access to the HPC software and hardware infrastructure needed for big data management and analysis.




Machine Learning


Development and application of machine learning and data mining algorithms for the modeling, classification and prediction of high-dimensional data.




Biostatistical Analysis


Expertise in a wide variety of statistical techniques and experimental design methods for bioinformatics and genomics studies.





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